CCP4 NEWSLETTER ON PROTEIN CRYSTALLOGRAPHYDec 19, 2005 ... satellite workshop - this time a joint effort between CCP4 and the RCSB PDB, at
the XX. IUCr Congress in Florence, Italy. This workshop - entitled "A Protein
Crystallographic. Toolbox: CCP4 Software Suite and PDB Deposition Tools" -
continues a tradition of collaboration between the two projects.Automating tasks in protein structure determination with the Clipper ...Jul 27, 2011 ... classical electron densities derived from X-ray diffrac- tion experiments to drive
the real space refinement of crystal structures. The refinement process ..... The
CCP4 suite: programs for protein crystallography. Acta Crystallogr. D Biol.
Crystallogr. 50, 760?763. Cramer, P., Bushnell, D.A., and Kornberg, R.D. ...Crystal Structure and Biochemical Characterization of ... - NRELSep 8, 2017 ... CCP-EM: Similar initiative to CCP4, but for supporting electron cryo-microscopy
methods. Clipper: An efficient C++ crystallographic library, written by Kevin
Cowtan (University of. York, UK). CCP4i2: The new graphical interface to the
CCP4 suite of programs, written in Python and heavily oriented towards ...Supplemental Materials - Endocytosis.orgNov 3, 2015 ... Here we report the FDX2 crystal struc- ture solved at 1.18 A? .... protein (Bertini et
al. 2002; Kameda et al. 2011). Four conserved amino acid residues present in
the two CrFDXs specifically contribute to electron donor/acceptor selectiv- ity in
vivo .... with the Bruker suite of programs version 2011.2-0 (Bruker.References - ShodhgangaDec 1, 2015 ... demonstrated for the first time that time-resolved near atomic resolution serial
crystallography was ... structures of the trans-cis isomerization of the photoactive
yellow protein (PYP) photocycle on the ...... programs described here in 'Italics'
are part of the CCP4 Crystallographic Software Suite (Bailey. 1994 ...Supplementary Materials for - Sciencemotif of nearly invariant geometry but considerable sequence varia- tion (1, 3). A
first crystallographic analysis of a complex of one of these, the DNA binding
domain of phage 434 repressor, with a synthetic DNA operator revealed an
intricate combination of direct protein-DNA interactions and DNA conformational
effects (4).Structure Determination of Membrane Proteins by Electron ... - edocBinding of peptides and proteins to appendage domains and was investigated by
ITC. (Wiseman et al, 1989) ... Titration curves were fitted to the data using the
ORIGIN program supplied by the manufacturer yielding the ...... using SCALA
from the CCP4 crystallographic suite (Collaborative Computational. Project, 1994
).
